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Add Biopragmatics registry#21

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matentzn merged 3 commits intomapping-commons:mainfrom
cthoyt:patch-1
Apr 21, 2026
Merged

Add Biopragmatics registry#21
matentzn merged 3 commits intomapping-commons:mainfrom
cthoyt:patch-1

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@cthoyt cthoyt commented Apr 21, 2026

This PR adds a new mapping registry for Biopragmatics. It's version controlled repository is https://github.com/biopragmatics/mapping-registry/. The registry file can be found at https://github.com/biopragmatics/mapping-registry/raw/refs/heads/main/registry.yml.

It contains:

  • a first-party registry describing the content in Biomappings
  • inter-registry mappings from the Bioregistry
  • large-scale raw mapping assembly from SeMRA
  • domain-specific mapping assemblies from SeMRA

Related, I also asked for upstream fixes in Monarch's version of Biomappings in monarch-initiative/monarch-mapping-commons#72

@cthoyt cthoyt changed the title Add first-party Biomappings configuration Add first-party Biomappings configuration and other biopragmatics mappings Apr 21, 2026
@cthoyt cthoyt changed the title Add first-party Biomappings configuration and other biopragmatics mappings Add Biopragmatics registry Apr 21, 2026
@matentzn matentzn merged commit 11c04dd into mapping-commons:main Apr 21, 2026
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@cthoyt cthoyt deleted the patch-1 branch April 21, 2026 16:47
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2 participants